Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009305 chr22:50100662 A/G PLA2G6 chr22:38507502-38601697:- 0.44 7.23 1.87E-12 Box Plot
THCA rs6009305 chr22:50100662 A/G POLR3H chr22:41921808-41940610:- 0.67 6.56 1.38E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G PPIL2 chr22:22020298-22054304:+ 0.68 6.85 2.33E-11 Box Plot
THCA rs6009305 chr22:50100662 A/G PPPDE2 chr22:41996936-42016916:- 0.51 6.27 8.24E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G RANBP1 chr22:20103461-20114880:+ 0.65 7.03 7.11E-12 Box Plot
THCA rs6009305 chr22:50100662 A/G RBX1 chr22:41347351-41369313:+ 0.53 7.35 8.8E-13 Box Plot
THCA rs6009305 chr22:50100662 A/G RNF215 chr22:30764800-30817760:- 0.61 6.57 1.35E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G SAMM50 chr22:44351301-44406411:+ 0.6 6.42 3.29E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G SF3A1 chr22:30727977-30752936:- 0.51 6.23 1.04E-9 Box Plot
THCA rs6009305 chr22:50100662 A/G SMCR7L chr22:39896105-39914136:+ 0.55 6.18 1.36E-9 Box Plot
THCA rs6009305 chr22:50100662 A/G SNRPD3 chr22:24951471-25005947:+ 0.62 6.71 5.4E-11 Box Plot
THCA rs6009305 chr22:50100662 A/G SRRD chr22:26879843-26890624:+ 0.75 6.8 3.08E-11 Box Plot
THCA rs6009305 chr22:50100662 A/G ST13 chr22:41220539-41253026:- 0.6 6.13 1.81E-9 Box Plot
THCA rs6009305 chr22:50100662 A/G TAB1 chr22:39795746-39833065:+ 0.7 6.39 3.98E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G TCF20 chr22:42556019-42739622:- 0.6 6.14 1.74E-9 Box Plot